STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0090Nitroreductase family protein. (210 aa)    
Predicted Functional Partners:
lwe0089
Monooxygenase family protein.
 
    0.886
lwe2184
Lactoylglutathione lyase, putative.
  
    0.639
lwe0582
Transcriptional regulator, MarR family.
 
  
 0.613
lwe0088
Transcriptional regulator, ArsR family.
  
    0.604
birA
Bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.566
lwe0236
Transcriptional regulator, MarR family.
 
  
 0.538
lwe0091
Conserved hypothetical protein.
       0.532
tadA
Cytidine/deoxycytidylate deaminase zinc-binding domain protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.494
lwe2529
Conserved hypothetical protein.
 
    0.478
lwe0636
ABC transporter, permease protein.
  
  
 0.469
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.