Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lwe0093Chitinase B. (760 aa)    
Predicted Functional Partners:
lwe1902
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 0.998
chb
Chitin-binding protein/carbohydrate-binding protein.
 
 
0.939
lwe1179
ABC transporter, permease protein.
  
 
 0.892
smc
Chromosome segregation SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.885
lwe0394
Wall-associated RHS family protein, putative.
 
 
 0.845
lwe0055
Hypothetical protein.
  
 
 0.748
lwe0508
Conserved hypothetical protein.
  
 
 0.748
lwe0039
Accessory gene regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
     0.670
lwe2300
Putative membrane protein.
  
     0.633
lwe1669
Putative secreted protein.
     
 0.573
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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