STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0093Chitinase B. (760 aa)    
Predicted Functional Partners:
lwe1902
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 0.996
lwe1179
ABC transporter, permease protein.
  
 
 0.901
smc
Chromosome segregation SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.896
chb
Chitin-binding protein/carbohydrate-binding protein.
 
 
0.864
lwe0039
Accessory gene regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
     0.670
qoxC
Cytochrome aa3 quinol oxidase, subunit III.
   
 
 0.668
qoxA
Cytochrome AA3 quinol oxidase, subunit II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.
   
 
 0.667
lwe2300
Putative membrane protein.
  
     0.633
fadD
Long-chain acyl-CoA synthetase.
  
  
 0.565
lwe0713
Hypothetical protein.
 
     0.544
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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