Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lwe0099ABC transporter, ATP-binding/permease protein. (580 aa)    
Predicted Functional Partners:
lwe0098
Putative ATPase; N-terminal part.
 
    
0.821
lwe0100
Transcriptional regulator, AraC family.
 
  
 0.698
lwe0772
AAA family ATPase.
 
 
 0.525
lwe0101
Lipase.
  
 
 0.480
dnaK
Class I heat-shock protein (molecular chaperone) DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.431
lwe0319
Chaperone HscA family protein, putative; Belongs to the heat shock protein 70 family.
  
 0.414
lwe2232
ABC transporter, ATP-binding protein.
  
 0.414
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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