STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaDRhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (278 aa)    
Predicted Functional Partners:
lwe0302
Triosephosphate isomerase.
  
 
 0.960
tpi
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.933
lwe0316
Fructose-bisphosphate aldolase, class II family.
  
 
 0.910
lwe2152
Fructose-bisphosphate aldolase, class II family.
  
 
 0.910
lwe2153
Fructose-bisphosphate aldolase, class II family.
  
 
 0.910
lwe0346
PTS system, IIA component.
 
  
 0.872
lwe0348
PTS system, galactitol-specific IIB component, putative.
 
  
 0.845
lwe0345
PRD/PTS system IIA 2 domain regulatory protein.
 
  
 0.762
lwe0349
PTS system, galactitol-specific IIC component, putative.
 
  
 0.749
lwe1696
Homocysteine S-methyltransferase family/methylenetetrahydrofolate reductase family protein.
 
  
 0.705
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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