STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (366 aa)    
Predicted Functional Partners:
lwe0764
Spermidine/putrescine ABC transporter permease protein.
 
 0.999
lwe0766
ABC transporter spermidine/putrescine binding protein.
 
 
 0.998
lwe0765
Spermidine/putrescine ABC transporter permease protein.
 
 
 0.997
lwe0762
Transcription regulator, putative.
 
    0.846
lwe1495
comEC/Rec2 family protein.
  
  
 0.508
lwe1439
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein.
  
 
 0.500
murB
UDP-N-acetylenolpyruvylglucosamine reductase; Cell wall formation.
  
  
 0.479
lwe1017
ABC transporter permease protein.
 
  
 0.469
lwe0840
Glutamine ABC transporter binding and transport protein, putative.
 
 
 0.468
lwe2266
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family.
 
 
 0.468
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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