STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0818Hypothetical protein. (322 aa)    
Predicted Functional Partners:
mvaA
Hydroxymethylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
       0.639
lwe0963
ABC transporter, permease protein.
  
     0.594
lwe0294
Putative membrane protein.
  
     0.546
lwe0817
Aldo/keto reductase family protein.
       0.539
lwe0962
ABC transporter, ATP-binding protein.
  
     0.518
lwe0730
Glycosyl hydrolase, putative.
  
     0.507
lwe2082
Copper resistance domain protein.
 
    0.451
lwe0463
Lipase/acylhydrolase family protein.
  
     0.425
lwe2621
Transcriptional regulator, AraC family.
  
     0.423
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.