Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
degU | lwe1004 | lwe2463 | lwe1004 | DNA-binding response regulator. | Putative membrane protein. | 0.476 |
degU | lwe1005 | lwe2463 | lwe1005 | DNA-binding response regulator. | Two-component sensor histidine kinase, putative. | 0.933 |
lwe0933 | lwe1004 | lwe0933 | lwe1004 | Conserved hypothetical protein. | Putative membrane protein. | 0.806 |
lwe0933 | lwe1005 | lwe0933 | lwe1005 | Conserved hypothetical protein. | Two-component sensor histidine kinase, putative. | 0.700 |
lwe0933 | lwe1652 | lwe0933 | lwe1652 | Conserved hypothetical protein. | ABC-type sugar transport system, ATPase component. | 0.652 |
lwe0933 | lwe2433 | lwe0933 | lwe2433 | Conserved hypothetical protein. | Hypothetical protein. | 0.974 |
lwe0933 | lwe2434 | lwe0933 | lwe2434 | Conserved hypothetical protein. | PspC domain protein. | 0.851 |
lwe0933 | lwe2435 | lwe0933 | lwe2435 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.802 |
lwe1004 | degU | lwe1004 | lwe2463 | Putative membrane protein. | DNA-binding response regulator. | 0.476 |
lwe1004 | lwe0933 | lwe1004 | lwe0933 | Putative membrane protein. | Conserved hypothetical protein. | 0.806 |
lwe1004 | lwe1005 | lwe1004 | lwe1005 | Putative membrane protein. | Two-component sensor histidine kinase, putative. | 0.985 |
lwe1004 | lwe1006 | lwe1004 | lwe1006 | Putative membrane protein. | DNA-binding response regulator; LuxR family. | 0.954 |
lwe1004 | lwe1007 | lwe1004 | lwe1007 | Putative membrane protein. | TrkA domain protein. | 0.794 |
lwe1004 | lwe1652 | lwe1004 | lwe1652 | Putative membrane protein. | ABC-type sugar transport system, ATPase component. | 0.656 |
lwe1004 | lwe1653 | lwe1004 | lwe1653 | Putative membrane protein. | ABC-type sugar transport system, ATPase component. | 0.713 |
lwe1004 | lwe2433 | lwe1004 | lwe2433 | Putative membrane protein. | Hypothetical protein. | 0.540 |
lwe1004 | lwe2434 | lwe1004 | lwe2434 | Putative membrane protein. | PspC domain protein. | 0.845 |
lwe1004 | lwe2435 | lwe1004 | lwe2435 | Putative membrane protein. | Conserved hypothetical protein. | 0.926 |
lwe1005 | degU | lwe1005 | lwe2463 | Two-component sensor histidine kinase, putative. | DNA-binding response regulator. | 0.933 |
lwe1005 | lwe0933 | lwe1005 | lwe0933 | Two-component sensor histidine kinase, putative. | Conserved hypothetical protein. | 0.700 |
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