STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe1048Conserved hypothetical protein; Belongs to the UPF0358 family. (93 aa)    
Predicted Functional Partners:
lwe2075
Conserved hypothetical protein; Belongs to the UPF0342 family.
 
     0.808
lwe1418
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
     0.734
lwe1049
Cell division protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
     
 0.656
fur
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
     0.625
lwe1047
Conserved hypothetical protein.
       0.591
lwe2349
Conserved hypothetical protein.
  
     0.506
lwe1624
Conserved hypothetical protein; Belongs to the UPF0354 family.
  
     0.453
pycA
Pyruvate carboxylase pycA; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.442
lwe1632
Protein kinase, putative.
  
     0.442
lwe2074
Conserved hypothetical protein.
 
     0.440
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.