STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe2035Alpha-mannosidase. (1032 aa)    
Predicted Functional Partners:
lwe2034
Glycosyl hydrolase, family 38.
 
  
 
0.956
lwe2033
Conserved hypothetical protein.
 
    0.719
lwe2030
DNA-binding response regulator.
 
    0.693
lwe2027
ABC transporter, substrate-binding protein.
 
     0.683
lwe2029
ABC transporter, permease protein, putative.
 
     0.614
lwe2028
ABC transporter, permease protein, putative.
 
     0.553
garK-2
Glycerate kinase 2; Belongs to the glycerate kinase type-1 family.
  
 
  0.525
lwe0726
Conserved hypothetical protein.
 
    0.524
lwe2032
Conserved hypothetical protein.
 
     0.513
cmk
Cytidylate kinase.
 
    0.469
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.