Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR149LOW QUALITY PROTEIN: probable G-protein coupled receptor 149. (752 aa)    
Predicted Functional Partners:
DHX36
LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36.
   
 0.769
PES1
Pescadillo homolog.
   
 0.767
GPR139
Probable G-protein coupled receptor 139.
      
 0.755
WDR12
Ribosome biogenesis protein WDR12 isoform X1.
   
 0.672
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 
 0.638
GGA1
ADP-ribosylation factor-binding protein GGA1.
      
 0.630
PPP4R4
Serine/threonine-protein phosphatase 4 regulatory subunit 4 isoform X1.
   
 0.629
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.628
FBL
RRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.624
KRR1
KRR1 small subunit processome component homolog.
   
 0.613
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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