Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXB7Homeobox protein HoxA/B7. (217 aa)    
Predicted Functional Partners:
HOXB6
Homeobox protein HoxA/B/C6.
   
 
 0.966
HOXB5
LOW QUALITY PROTEIN: homeobox protein Hox-B5.
   
 
 0.963
HOXA6
Homeobox protein HoxA/B/C6.
   
 
 0.927
HOXA7
Homeobox protein HoxA/B7.
   
 
 0.827
HOXC5
Homeobox protein HoxA/B/C5.
   
   0.789
HOXC6
LOW QUALITY PROTEIN: homeobox protein Hox-C6-like.
   
 
 0.771
NR5A1
Steroidogenic factor 1 isoform X1.
    
 0.747
HOXD4
Homeobox protein HoxA/B/C/D4.
   
 
 0.747
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 0.747
HOXB4
Homeobox protein HoxA/B/C/D4.
   
 
 0.728
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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