STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP8Matrix metalloproteinase-8 (neutrophil collagenase). (471 aa)    
Predicted Functional Partners:
TIMP1
Metalloproteinase inhibitor 1.
   
 0.807
TIMP2
Metalloproteinase inhibitor 2.
   
 0.769
TIMP3
Metalloproteinase inhibitor 3.
   
 0.702
TIMP4
Metalloproteinase inhibitor 4.
   
 0.637
ELANE
Neutrophil elastase.
   
 0.615
ENSPCIP00000011589
Myeloblastin-like.
   
 0.615
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 0.601
MMP7
Matrix metalloproteinase-7 (matrilysin, uterine).
  
0.580
MMP9
Matrix metalloproteinase-9 (gelatinase B).
  
0.543
PLG
LOW QUALITY PROTEIN: plasminogen.
   
 0.543
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.