STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD50DNA repair protein RAD50. (1312 aa)    
Predicted Functional Partners:
NBN
Nibrin isoform X1.
   
 0.999
MRE11
LOW QUALITY PROTEIN: double-strand break repair protein MRE11.
  
 0.999
ATM
LOW QUALITY PROTEIN: serine-protein kinase ATM.
   
 0.992
RBBP8
DNA endonuclease RBBP8 isoform X1.
    
 0.986
WRN
Werner syndrome ATP-dependent helicase.
  
 0.984
XRCC6
X-ray repair cross-complementing protein 6 isoform X1.
   
 0.964
BARD1
LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1.
    
 0.963
SLF1
SMC5-SMC6 complex localization factor protein 1 isoform X1.
   
 0.960
ATR
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
   
 0.951
FEN1
Flap endonuclease 1.
  
 0.947
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.