STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS4Thrombospondin 2/3/4/5. (955 aa)    
Predicted Functional Partners:
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.950
ITGB3
Integrin beta 3.
    
 0.948
ITGAV
Integrin alpha V.
   
 0.938
ITGB1
Integrin beta-1 isoform X1.
    
 0.928
ITGA2B
Integrin alpha-IIb isoform X1.
   
 0.923
CD36
Platelet glycoprotein 4.
   
 0.922
SDC1
Syndecan-1 isoform X1.
    
 0.918
ITGA3
Integrin alpha 3.
   
 0.915
SDC4
Syndecan 4.
    
  0.906
ITGB5
Integrin beta 5.
    
 0.778
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.