STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A5Solute carrier family 30 (zinc transporter), member 5/7. (772 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 (zinc transporter), member 6.
   
 
0.868
TTR
Transthyretin.
   
  
 0.650
COL3A1
Collagen alpha-1(III) chain isoform X1.
   
 
 0.631
SLC39A7
Solute carrier family 39 (zinc transporter), member 7.
  
 0.621
SLC39A9
Solute carrier family 39 (zinc transporter), member 9.
   
 
 0.612
SLC30A9
Solute carrier family 30 (zinc transporter), member 9.
  
 
 0.606
SLC39A13
Solute carrier family 39 (zinc transporter), member 13.
   
 0.600
TMEM19
Transmembrane protein 19 isoform X1.
   
  
 0.569
COL4A2
Collagen alpha-2(IV) chain.
   
 
 0.566
TSPAN13
Tetraspanin-13 isoform X1.
      
 0.545
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.