STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNPLA4Patatin like phospholipase domain containing 4. (263 aa)    
Predicted Functional Partners:
RDH13
Retinol dehydrogenase 13 isoform X1.
   
 
 0.930
RETSAT
All-trans-retinol 13,14-reductase isoform X1.
     
 0.918
ENSPCIP00000012924
All-trans-retinol 13,14-reductase-like isoform X1.
     
 0.918
DHRS3
Short-chain dehydrogenase/reductase 3 isoform X1.
     
 0.917
ENSPCIP00000046514
Dehydrogenase/reductase SDR family member 4-like.
   
 
 0.917
RDH12
Retinol dehydrogenase 12 isoform X1.
   
 
 0.914
RDH11
Retinol dehydrogenase 11.
   
 
 0.914
DHRS9
Dehydrogenase/reductase SDR family member 9.
     
 0.910
RDH10
Retinol dehydrogenase 10.
     
 0.910
RDH16
LOW QUALITY PROTEIN: retinol dehydrogenase 16.
     
 0.910
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.