STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPLA4Patatin like phospholipase domain containing 4. (263 aa)    
Predicted Functional Partners:
PUDP
Pseudouridine 5'-phosphatase.
      
 0.651
LIPE
LOW QUALITY PROTEIN: hormone-sensitive lipase.
   
 
 0.583
CPPED1
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase CPPED1.
      
 0.576
GYG2
Glycogenin-2 isoform X1.
      
 0.561
ABHD5
1-acylglycerol-3-phosphate O-acyltransferase ABHD5 isoform X1.
    
 
 0.537
ASMTL
Acetylserotonin O-methyltransferase like.
   
  
 0.519
CTPS2
CTP synthase 2 isoform X1.
      
 0.502
ENSPCIP00000036719
annotation not available
      
 0.463
CDC42SE1
CDC42 small effector protein 1.
      
 0.463
MED14
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14.
      
 0.459
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.