STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM161ATransmembrane protein 161A isoform X1. (479 aa)    
Predicted Functional Partners:
OGFOD3
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 isoform X1.
   
  
 0.848
PIGB
GPI mannosyltransferase 3.
      
 0.841
ZDHHC6
Palmitoyltransferase ZDHHC6.
      
 0.841
TMEM53
Transmembrane protein 53 isoform X1.
      
 0.841
VRK2
Serine/threonine-protein kinase VRK2 isoform X1.
      
 0.827
GPAT4
Glycerol-3-phosphate O-acyltransferase 3/4.
      
 0.766
TMEM214
Transmembrane protein 214.
      
 0.756
TMEM209
Transmembrane protein 209 isoform X1.
      
 0.756
TMX4
Thioredoxin-related transmembrane protein 4 isoform X1.
      
 0.755
HSD11B1
Corticosteroid 11-beta-dehydrogenase isozyme 1 isoform X1.
      
 0.730
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.