Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DZANK1Double zinc ribbon and ankyrin repeat-containing protein 1 isoform X1. (753 aa)    
Predicted Functional Partners:
TROAP
Tastin.
      
 0.615
RBBP9
Putative hydrolase RBBP9.
 
    
 0.564
TSPAN9
Tetraspanin-9 isoform X1.
      
 0.504
ZMYND12
Zinc finger MYND-type containing 12.
      
 0.502
CEP128
LOW QUALITY PROTEIN: centrosomal protein of 128 kDa.
      
 0.500
POLR3F
LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC6.
      
 0.490
ARHGDIG
Rho GDP-dissociation inhibitor 3 isoform X1.
      
 0.488
SVOPL
Putative transporter SVOPL.
      
 0.466
VSIG2
V-set and immunoglobulin domain-containing protein 2.
      
 0.449
IDH3G
Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial.
      
 0.441
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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