Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STXBP1Syntaxin-binding protein 1 isoform X1. (750 aa)    
Predicted Functional Partners:
STX1B
Syntaxin-1B isoform X1.
   
 0.995
STX1A
Syntaxin 1A.
   
 0.995
STX3
Syntaxin 3.
   
 0.992
STX2
Syntaxin-2 isoform X1.
   
 0.990
SNAP25
Synaptosomal-associated protein 25 isoform X1.
   
 0.987
APBA1
LOW QUALITY PROTEIN: amyloid beta A4 precursor protein-binding family A member 1.
   
 0.942
VAMP2
Vesicle-associated membrane protein 2.
   
 0.933
SYTL4
Synaptotagmin-like protein 4 isoform X1.
    
 0.881
STX4
Syntaxin 4.
   
 0.875
VAMP3
Vesicle-associated membrane protein 3.
    
 0.866
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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