Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC46Leucine-rich repeat-containing protein 46. (312 aa)    
Predicted Functional Partners:
PACS2
Phosphofurin acidic cluster sorting protein 2 isoform X1.
    
   0.832
POLE2
DNA polymerase epsilon 2, accessory subunit.
   
   0.818
POLE
LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A.
   
   0.797
DRC7
Dynein regulatory complex subunit 7 isoform X1.
   
 
 0.683
CFAP161
Cilia- and flagella-associated protein 161 isoform X1.
    
 0.658
ZMYND10
Zinc finger MYND domain-containing protein 10 isoform X1.
   
 
 0.633
RUNDC1
RUN domain-containing protein 1.
      
 0.583
BET1L
Blocked early in transport 1.
      
 0.574
TFPT
TCF3 fusion partner isoform X1.
    
 0.550
ASCC2
LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 2.
      
 0.546
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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