STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61BProtein transport protein SEC61 subunit beta. (96 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63 homolog.
    
 
 0.996
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
   
 0.993
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.985
SEC61A2
Protein transport protein Sec61 subunit alpha isoform X1.
   
 0.985
ENSPCIP00000023745
annotation not available
   
 0.938
SSR2
Translocon-associated protein subunit beta.
   
 0.937
SSR3
Translocon-associated protein subunit gamma.
   
 0.921
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
 0.916
ENSPCIP00000002547
annotation not available
   
  0.907
ENSPCIP00000005738
annotation not available
   
  0.907
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.