Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IGFBP7LOW QUALITY PROTEIN: insulin-like growth factor-binding protein 7. (286 aa)    
Predicted Functional Partners:
CCDC80
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 80.
   
  
 0.993
DCN
Decorin.
   
 
 0.993
MTRR
Methionine synthase reductase.
      
 0.841
PROKR1
Prokineticin receptor 1.
      
 0.841
ST3GAL1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1.
   
  
 0.841
CDX1
LOW QUALITY PROTEIN: homeobox protein CDX-1.
      
 0.810
NCAPG
Condensin complex subunit 3.
      
 0.756
GHSR
Growth hormone secretagogue receptor type 1.
      
 0.755
IGFBP5
Insulin like growth factor binding protein 5.
     
 0.726
EGF
Pro-epidermal growth factor isoform X1.
      
 0.716
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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