STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000001135annotation not available (334 aa)    
Predicted Functional Partners:
ADGRV1
LOW QUALITY PROTEIN: G-protein coupled receptor 98.
 
     0.941
PDZD7
PDZ domain-containing protein 7 isoform X1.
    
 
 0.583
USH1C
USH1 protein network component harmonin.
    
 
 0.583
WHRN
LOW QUALITY PROTEIN: whirlin.
    
 
 0.566
USH2A
LOW QUALITY PROTEIN: usherin.
      
 0.564
STOX1
LOW QUALITY PROTEIN: storkhead-box protein 1.
      
 0.557
SLC17A8
Vesicular glutamate transporter 3.
   
  
 0.551
OTOGL
Otogelin-like protein.
    
 
 0.548
USH1G
Usher syndrome type-1G protein isoform X1.
    
 
 0.547
RPGRIP1L
Protein fantom isoform X1.
      
 0.546
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.