STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJA4Gap junction alpha-4 protein. (356 aa)    
Predicted Functional Partners:
GJA5
Gap junction alpha-5 protein.
    
0.658
TJP1
Tight junction protein ZO-1 isoform X1.
   
 0.627
TJP3
Tight junction protein ZO-3 isoform X1.
   
 0.627
TJP2
Tight junction protein ZO-2 isoform X1.
   
 0.627
GJA1
Gap junction alpha-1 protein.
      
0.561
BMX
Cytoplasmic tyrosine-protein kinase BMX isoform X1.
    
 0.505
DAB2
Disabled homolog 2 isoform X1.
   
 
 0.497
GJB6
Gap junction beta-6 protein.
  
 
0.458
APLNR
Apelin receptor.
   
  
 0.451
GJB1
Gap junction beta-1 protein.
    
0.431
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.