Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB11Serpin B11 isoform X1. (391 aa)    
Predicted Functional Partners:
F2
Coagulation factor II (thrombin).
   
 0.663
CTSS
Cathepsin S.
    
 0.517
ENSPCIP00000023393
annotation not available
      
 0.495
KRT77
Keratin, type II cytoskeletal 1b-like.
    
 0.484
FGA
Fibrinogen alpha chain.
   
 0.436
VTN
Vitronectin.
   
  0.430
FGG
Fibrinogen gamma chain isoform X1.
   
 0.422
KRT80
Keratin, type II cytoskeletal 80.
   
 
 0.422
KLK9
Kallikrein 9.
   
 0.421
MB
Myoglobin.
   
 
 0.415
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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