Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM7Tripartite motif containing 7. (503 aa)    
Predicted Functional Partners:
GYG1
Glycogenin-1 isoform X1.
   
 0.959
GYG2
Glycogenin-2 isoform X1.
   
 0.906
UBE2D1
Ubiquitin-conjugating enzyme E2 D1.
    
 0.840
ENSPCIP00000005621
annotation not available
    
  0.673
ENSPCIP00000008619
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like isoform X1.
    
  0.673
ARMC12
Armadillo repeat-containing protein 12.
    
 
 0.633
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
 0.609
UBE2D3
Ubiquitin-conjugating enzyme E2 D3 isoform X1.
    
 0.596
ENSPCIP00000046645
T-cell receptor-associated transmembrane adapter 1.
      
 0.588
TUBGCP4
Gamma-tubulin complex component 4.
    
 0.566
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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