Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000001208Semaphorin-4E-like isoform X1. (802 aa)    
Predicted Functional Partners:
CD72
B-cell differentiation antigen CD72 isoform X1.
    
 0.948
PLXNB2
LOW QUALITY PROTEIN: plexin-B2.
    
 0.912
PLXNB3
LOW QUALITY PROTEIN: plexin-B3.
    
0.912
PLXNB1
Plexin B1.
    
0.912
ENSPCIP00000029413
annotation not available
    
 0.752
ENSPCIP00000029419
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase C-like.
    
 0.752
RND1
Rho-related GTP-binding protein Rho6.
    
 0.669
MET
Proto-oncogene tyrosine-protein kinase Met.
   
 0.611
RRAS
LOW QUALITY PROTEIN: ras-related protein R-Ras.
    
 0.607
RRAS2
Ras-related protein R-Ras2 isoform X1.
    
 0.607
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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