STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPHS2Selenide, water dikinase 2. (346 aa)    
Predicted Functional Partners:
SEPSECS
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase.
     
 0.967
SCLY
Selenocysteine lyase.
   
 0.957
TXNRD2
Thioredoxin reductase 2, mitochondrial isoform X1.
  
 
 0.925
TXNRD3
Thioredoxin reductase 3 isoform X1.
  
 
 0.921
TXNRD1
LOW QUALITY PROTEIN: thioredoxin reductase 1, cytoplasmic.
  
 
 0.921
SEPHS1
Selenide, water dikinase 1.
  
  
 
0.901
ENSPCIP00000036794
Selenide, water dikinase 2 isoform X1.
  
  
 
0.900
TRMT12
TRNA wybutosine-synthesizing protein 2 homolog isoform X1.
      
 0.639
MOCOS
LOW QUALITY PROTEIN: molybdenum cofactor sulfurase.
    
 0.566
EEFSEC
Selenocysteine-specific elongation factor isoform X1.
     
 0.522
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.