STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC11LOW QUALITY PROTEIN: thioredoxin domain-containing protein 11. (945 aa)    
Predicted Functional Partners:
EDEM2
LOW QUALITY PROTEIN: ER degradation-enhancing alpha-mannosidase-like protein 2.
   
 
 0.927
DUOXA2
Dual oxidase maturation factor 2.
     
 0.880
FBLN7
Fibulin-7 isoform X1.
    
  0.821
ENSPCIP00000013606
Fibulin-7-like.
    
  0.821
DUOXA1
Dual oxidase maturation factor 1 isoform X1.
     
 0.813
ANKRD45
Ankyrin repeat domain-containing protein 45 isoform X1.
   
 0.763
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.763
RBL1
Retinoblastoma-like protein 1 isoform X1.
    
   0.696
ERO1B
ERO1-like protein beta.
   
 0.685
CAV1
Caveolin-1 isoform X1.
    
  0.656
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.