Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPBMajor centromere autoantigen B. (590 aa)    
Predicted Functional Partners:
CENPA
LOW QUALITY PROTEIN: histone H3-like centromeric protein A.
    
 
 0.917
RSF1
Remodeling and spacing factor 1 isoform X1.
    
 
 0.841
DAXX
Death domain-associated protein 6 isoform X1.
   
 
 0.658
KIF18A
Kinesin-like protein KIF18A isoform X1.
      
 0.629
FAR1
Alcohol-forming fatty acyl-CoA reductase.
      
 0.628
ENSPCIP00000045540
annotation not available
      
 0.628
INCENP
Inner centromere protein isoform X1.
    
 
 0.560
CENPI
Centromere protein I.
      
 0.546
RO60
60 kDa SS-A/Ro ribonucleoprotein isoform X1.
      
 0.546
HOOK3
LOW QUALITY PROTEIN: protein Hook homolog 3.
      
 0.521
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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