STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPHK2Sphingosine kinase 2. (247 aa)    
Predicted Functional Partners:
SGPL1
Sphinganine-1-phosphate aldolase.
   
 0.961
ASAH1
Acid ceramidase.
     
 0.946
ACER2
Alkaline ceramidase 2.
    
 0.945
ACER3
Alkaline ceramidase 3 isoform X1.
    
 0.943
SGPP1
Sphingosine-1-phosphate phosphatase 1.
  
 0.939
SGPP2
Sphingosine-1-phosphate phosphatase 2 isoform X1.
  
 0.939
KDSR
3-ketodihydrosphingosine reductase isoform X1.
     
 0.938
ACER1
Alkaline ceramidase 1.
    
 0.934
PRKCB
Protein kinase C beta type isoform X1.
     
 0.933
PRKCG
LOW QUALITY PROTEIN: protein kinase C gamma type.
     
  0.933
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.