Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DBPAlbumin D box-binding protein. (123 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
    
 0.938
PER3
Period circadian protein homolog 3.
   
 0.936
PER1
Period circadian protein homolog 1.
   
 0.936
PER2
Period circadian regulator 2.
   
 0.936
CLOCK
Circadian locomoter output cycles protein kaput isoform X1.
    
 0.932
ENSPCIP00000005246
annotation not available
    
 0.932
NPAS2
Neuronal PAS domain-containing protein 2 isoform X1.
    
 0.932
NR1D2
Nuclear receptor subfamily 1 group D member 2 isoform X1.
    
 0.926
NR1D1
Nuclear receptor subfamily 1 group D member 1.
   
 0.918
RORC
Nuclear receptor ROR-gamma isoform X1.
    
 0.912
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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