Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJB4Gap junction protein beta 4. (235 aa)    
Predicted Functional Partners:
GJA4
Gap junction alpha-4 protein.
  
  
0.663
GJB6
Gap junction beta-6 protein.
  
  
0.641
GJC2
Gap junction gamma-2 protein isoform X1.
  
  
 
0.641
GJB3
Gap junction beta-3 protein.
  
 
 
0.637
GJC1
Gap junction gamma-1 protein.
  
  
 
0.632
GJD2
Gap junction delta-2 protein.
  
  
 
0.631
GJA5
Gap junction alpha-5 protein.
  
  
 
0.628
GJE1
Gap junction epsilon-1 protein-like.
     
 0.622
GJB1
Gap junction beta-1 protein.
  
  
0.602
GJA8
Gap junction alpha-8 protein.
  
  
 
0.597
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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