STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA11LOW QUALITY PROTEIN: carbonic anhydrase-related protein 11. (325 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.608
RPL5
60S ribosomal protein L5 isoform X1.
    
 
 0.532
REM2
Rad and Gem related GTP binding protein 2.
   
  
 0.527
UTP18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
  
 0.520
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.510
RRS1
Ribosome biogenesis regulatory protein homolog.
   
 
 0.507
REM1
GTP-binding protein REM 1.
   
  
 0.493
SLC4A2
Solute carrier family 4 (anion exchanger), member 2.
   
 
 0.459
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
  
 0.452
RRP12
Ribosomal RNA-processing protein 12.
   
  
 0.442
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.