Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT85Keratin, type II cuticular Hb5 isoform X1. (506 aa)    
Predicted Functional Partners:
KRT82
Keratin 82.
   
  0.726
KRT84
Keratin 84.
   
  0.693
KRT35
Keratin, type I cuticular Ha5-like.
   
 0.652
ENSPCIP00000007040
Keratin, type I cuticular Ha8-like.
   
 0.620
RFX8
DNA-binding protein RFX8 isoform X1.
      
 0.616
TUSC1
Tumor suppressor candidate 1.
      
 0.503
ENSPCIP00000007058
Keratin, type I cuticular Ha1-like.
   
 0.499
ENSPCIP00000007060
Keratin, type I cuticular Ha3-I.
   
 0.499
ENSPCIP00000007068
Keratin, type I cuticular Ha4-like.
   
 0.499
ENSPCIP00000007076
Keratin, type I cuticular Ha1-like.
   
 0.499
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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