STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPDLOW QUALITY PROTEIN: pulmonary surfactant-associated protein D-like. (373 aa)    
Predicted Functional Partners:
SFTPC
Pulmonary surfactant-associated protein C isoform X1.
   
 
 0.942
ENSPCIP00000051645
Pulmonary surfactant-associated protein A-like.
  
0.875
ENSPCIP00000044141
annotation not available
   
 
 0.804
AGER
Advanced glycosylation end product-specific receptor.
   
 
 0.632
SCGB3A2
Secretoglobin family 3A member 2.
   
  
 0.631
MASP2
Mannan-binding lectin serine protease 2 isoform X1.
   
 0.571
ENSPCIP00000037161
Pulmonary surfactant-associated protein A-like.
   
0.554
DCN
Decorin.
   
 0.551
MUC1
Mucin-1.
   
 0.543
SLC34A2
Solute carrier family 34 (sodium-dependent phosphate cotransporter).
   
 
 0.538
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.