STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATE1Arginyl-tRNA--protein transferase 1 isoform X1. (565 aa)    
Predicted Functional Partners:
NTAN1
LOW QUALITY PROTEIN: protein N-terminal asparagine amidohydrolase.
    
 
 0.673
EIF1AX
Eukaryotic translation initiation factor 1A, X-chromosomal.
     
 0.635
UBR1
E3 ubiquitin-protein ligase UBR1 isoform X1.
   
 
 0.608
UBR2
E3 ubiquitin-protein ligase UBR2 isoform X1.
   
 
 0.595
UBR4
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4.
      
 0.563
GPR158
Probable G-protein coupled receptor 158.
      
 0.562
NAA80
N-acetyltransferase 6 isoform X1.
      
 0.559
UBR3
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR3.
   
  
 0.557
PPAT
Amidophosphoribosyltransferase.
      
 0.554
UBR5
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5.
      
 0.532
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.