STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAMSTRMEF2-activating motif and SAP domain-containing transcriptional regulator isoform X1. (460 aa)    
Predicted Functional Partners:
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein isoform X1.
   
 
 0.567
CPED1
Cadherin like and PC-esterase domain containing 1.
      
 0.564
RBM47
RNA-binding protein 47 isoform X1.
      
 0.562
RAB11A
Ras-related protein Rab-11A.
   
 0.492
ENSPCIP00000016055
Rab-like protein 2A isoform X1.
   
 0.492
RAB25
Ras-related protein Rab-25.
   
 0.492
RAB11B
Ras-related protein Rab-11B isoform X1.
   
 0.492
ENSPCIP00000038802
annotation not available
   
 0.492
EXOC4
Exocyst complex component 4 isoform X1.
    
 0.467
CCDC154
Coiled-coil domain-containing protein 154 isoform X1.
  
 
 
 0.464
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.