Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARHGAP23LOW QUALITY PROTEIN: rho GTPase-activating protein 23. (1386 aa)    
Predicted Functional Partners:
CCDC51
Coiled-coil domain-containing protein 51 isoform X1.
      
 0.625
CCDC85A
Coiled-coil domain-containing protein 85A isoform X1.
    
 
 0.617
CCDC85C
Coiled-coil domain-containing protein 85C isoform X1.
    
 
 0.595
FNBP1
Formin-binding protein 1 isoform X1.
    
 0.586
ZNF541
Zinc finger protein 541.
      
 0.564
TMEM200C
Transmembrane protein 200C.
  
   
 0.564
KRTCAP2
Keratinocyte-associated protein 2.
      
 0.513
GRSF1
G-rich sequence factor 1.
   
  
 0.484
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
   
 
 0.475
RND1
Rho-related GTP-binding protein Rho6.
    
 0.464
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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