STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM1Calcium homeostasis modulator protein 1. (341 aa)    
Predicted Functional Partners:
SCN3A
Sodium channel protein type 3 subunit alpha isoform X1.
   
 
 0.903
ENSPCIP00000035222
Sodium channel protein type 9 subunit alpha isoform X1.
   
 
 0.903
SCN2A
Sodium channel protein type 2 subunit alpha isoform X1.
   
 
 0.903
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.703
CALHM3
Calcium homeostasis modulator protein 3.
  
  
0.693
PDE1A
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1.
      
 0.660
PANX1
Pannexin-1 isoform X1.
      
 0.584
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1.
      
 0.583
TRPM4
Transient receptor potential cation channel subfamily M member 4.
      
 0.578
OTOP1
LOW QUALITY PROTEIN: otopetrin-1.
   
  
 0.578
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.