STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1ARas-GEF domain-containing family member 1A isoform X1. (485 aa)    
Predicted Functional Partners:
CUX2
LOW QUALITY PROTEIN: homeobox protein cut-like 2.
   
  
 0.482
SBNO1
Protein strawberry notch homolog 1 isoform X1.
      
 0.461
RAPGEF2
Rap guanine nucleotide exchange factor 2 isoform X1.
    
 
0.424
RIOX1
Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66.
      
 0.424
RIOK1
Serine/threonine-protein kinase RIO1 isoform X1.
      
 0.424
TGFBRAP1
Transforming growth factor-beta receptor-associated protein 1.
      
 0.418
SOS1
LOW QUALITY PROTEIN: son of sevenless homolog 1.
   
0.408
TIAM1
LOW QUALITY PROTEIN: T-lymphoma invasion and metastasis-inducing protein 1.
   
  
 0.404
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.