Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPB41L5Band 4.1-like protein 5 isoform X1. (731 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.652
CRB1
Protein crumbs homolog 1.
    
 
 0.643
MPP5
MAGUK p55 subfamily member 5.
    
 0.621
EPB41L2
Band 4.1-like protein 2 isoform X1.
     
 0.596
TMEM185A
Transmembrane protein 185A isoform X1.
      
 0.590
CHD9
Chromodomain-helicase-DNA-binding protein 9 isoform X1.
    
   0.589
NAP1L1
Nucleosome assembly protein 1-like 1 isoform X1.
    
 
 0.567
SMC1B
Structural maintenance of chromosomes 1B.
      
 0.556
SMC1A
Structural maintenance of chromosomes protein 1A.
      
 0.556
CRB2
Protein crumbs homolog 2.
    
 
 0.553
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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