Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP22Ubiquitin carboxyl-terminal hydrolase 22 isoform X1. (523 aa)    
Predicted Functional Partners:
TADA3
Transcriptional adapter 3.
    
 0.984
TRRAP
LOW QUALITY PROTEIN: transformation/transcription domain-associated protein.
    
 0.982
TAF10
TATA-box binding protein associated factor 10.
    
 0.982
TADA2B
Transcriptional adapter 2-beta isoform X1.
   
 0.979
ENY2
Enhancer of yellow 2 transcription factor.
    
 0.975
ATXN7L3
SAGA-associated factor 11.
    
 0.970
SGF29
SAGA-associated factor 29 isoform X1.
   
 0.968
KAT2B
LOW QUALITY PROTEIN: histone acetyltransferase KAT2B.
    
 0.967
KAT2A
Histone acetyltransferase KAT2A isoform X1.
    
 0.967
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.961
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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