STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF13BTumor necrosis factor receptor superfamily member 13B isoform X1. (260 aa)    
Predicted Functional Partners:
TNFSF13B
Tumor necrosis factor ligand superfamily member 13B.
    
 0.993
ENSPCIP00000054296
Tumor necrosis factor ligand superfamily member 13.
    
 0.978
CAMLG
Calcium signal-modulating cyclophilin ligand.
    
 
 0.789
TNFRSF17
Tumor necrosis factor receptor superfamily member 17.
   
  
 0.685
TNFSF12
TNF superfamily member 12.
      
 0.621
CD40LG
Tumor necrosis factor ligand superfamily member 5.
      
 0.580
ICOS
Inducible T-cell co-stimulator.
      
 0.468
TOP1MT
DNA topoisomerase I, mitochondrial isoform X1.
      
 0.465
MYD88
Myeloid differentiation primary response protein MyD88.
    
 
 0.451
TRAF6
TNF receptor-associated factor 6.
    
 
 0.435
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.