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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAF1FAS-associated factor 1 isoform X1. (661 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 0.993
UFD1
Ubiquitin fusion degradation protein 1 homolog.
    
 
 0.975
UBXN1
UBX domain-containing protein 1/4.
   
 
0.969
UBXN7
UBX domain-containing protein 7.
    
 
0.968
FAS
Tumor necrosis factor receptor superfamily member 6.
    
 0.966
UBXN6
UBX domain-containing protein 6.
    
 
 0.961
NPLOC4
Nuclear protein localization protein 4 homolog isoform X1.
   
 
 0.958
UBXN2B
UBX domain-containing protein 2B isoform X1.
    
 
 0.951
FADD
FAS-associated death domain protein.
   
 0.951
ASPSCR1
Tether containing UBX domain for GLUT4 isoform X1.
    
 
 0.949
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.