Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPHB1LOW QUALITY PROTEIN: ephrin type-B receptor 1. (544 aa)    
Predicted Functional Partners:
EFNB1
LOW QUALITY PROTEIN: ephrin-B1.
   
 0.991
EFNB2
Ephrin-B2.
   
 0.989
EFNB3
Ephrin-B3.
   
 0.987
RASA1
Ras GTPase-activating protein 1.
   
 0.944
ABL1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
0.925
NGEF
Neuronal guanine nucleotide exchange factor.
    
 0.921
EPHA6
Ephrin type-A receptor 6 isoform X1.
 
 
  0.917
ENSPCIP00000000943
annotation not available
 
      0.889
EFNA5
Ephrin-A5 isoform X1.
   
 0.816
EFNA2
Ephrin-A2.
   
 0.729
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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