Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC155LOW QUALITY PROTEIN: protein KASH5. (409 aa)    
Predicted Functional Partners:
ENSPCIP00000049772
annotation not available
    
 0.950
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.901
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.758
ENSPCIP00000017340
SUN domain-containing protein 3-like isoform X1.
    
 0.751
DKKL1
Dickkopf-like protein 1 isoform X1.
  
 
 0.750
SYNE4
Nesprin-4.
    
 0.750
ENSPCIP00000044103
annotation not available
    
 0.740
LRMP
Lymphoid-restricted membrane protein.
 
    
 0.713
GPR82
Probable G-protein coupled receptor 82.
      
 0.707
SPAG4
Sperm-associated antigen 4 protein isoform X1.
    
 0.690
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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