Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4239S ribosomal protein L42, mitochondrial. (197 aa)    
Predicted Functional Partners:
MRPL32
39S ribosomal protein L32, mitochondrial.
   
 0.977
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 0.976
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1 isoform X1.
   
  0.966
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 0.954
MRPL50
Mitochondrial ribosomal protein L50.
   
 0.951
MRPL16
39S ribosomal protein L16, mitochondrial.
    
 0.948
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 0.948
MRPL55
39S ribosomal protein L55, mitochondrial.
   
 0.945
MRPL47
39S ribosomal protein L47, mitochondrial isoform X1.
   
 0.944
ENSPCIP00000036460
annotation not available
   
 0.944
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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