STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A2MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2. (514 aa)    
Predicted Functional Partners:
SLC32A1
Solute carrier family 32 (vesicular inhibitory amino acid transporter).
     
 0.931
SLC17A6
Vesicular glutamate transporter 2.
     
 0.927
SLC17A7
Vesicular glutamate transporter 1.
     
 0.926
SLC17A8
Vesicular glutamate transporter 3.
     
 0.922
SLC18A3
Vesicular acetylcholine transporter.
  
  
0.903
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
     
 0.776
VAMP2
Vesicle-associated membrane protein 2.
   
 
 0.732
PDZD8
LOW QUALITY PROTEIN: PDZ domain-containing protein 8.
      
 0.700
CASK
Calcium/calmodulin-dependent serine protein kinase.
     
 0.688
TNNI1
Troponin I, slow skeletal muscle.
      
 0.674
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.