STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT6TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1. (506 aa)    
Predicted Functional Partners:
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
 0.998
TRMT61B
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
 0.983
FTSJ3
AdoMet-dependent rRNA methyltransferase SPB1.
   
  
 0.890
METTL1
TRNA (guanine-N(7)-)-methyltransferase.
   
  
 0.881
WDR12
Ribosome biogenesis protein WDR12 isoform X1.
   
    0.836
DDX56
Probable ATP-dependent RNA helicase DDX56 isoform X1.
   
   0.812
WDR74
Ribosome biogenesis protein NSA1.
   
    0.812
RPF2
Ribosome production factor 2 homolog.
   
  
 0.812
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
   
   0.804
RBM19
Multiple RNA-binding domain-containing protein 1.
   
    0.795
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.